Author

Pan Xu

Jiangsu Agri-animal Husbandry Vocational College

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Same name, identified by ORCID

Biology Disciplines

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Bioinformatics· 1 Evolutionary Biology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 1 Approach:contrastive learning· 1 Approach:deep learning· 1 Approach:experimental assay· 1 Assay:metabolomics· 1 Research Focus:phylogenetics / evolution· 1 Organism:plant (other)· 1 Approach:statistical model· 1

Frequent Co-Authors

Baojun ShiiD· 1 shared Chengyi SongiD· 1 shared Di LiuiD· 1 shared Dongjie ZhangiD· 1 shared Hongwei Holly YiniD· 1 shared Jian MaiD· 1 shared Jian Wang· 1 shared Jianhai CheniD· 1 shared

Activity by Year

2023-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 16 mutual co-author links

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1 shared paperMicrobiology

Baojun ShiORCID

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Author profile →

3 papers

Recent·Most cited

Genomic Insights into the Demographic History and Local Adaptation of Wild Boars Across Eurasia

Zishuai Wang, Zixin Li, Tao Huang, Jianhai Chen, Pan Xu, Ruimin Qiao, Hongwei Holly Yin, Chengyi Song, Dongjie Zhang, Di Liu, Shuhong Zhao, Martien A. M. Groenen, Ole Madsen, Yanlin Zhang, Lijing Bai, Kui Li

The paper analyzes whole-genome data from wild boars to trace their demographic history and identify genetic signatures of local adaptation in Central Asia.

Cell Genomics · Jul 24, 2025Peer-reviewedEvolutionary Biology

Metabolomics profiling reveals association of fermented herbal feed additive, growth performance and gut microbiota in piglets

Ruiming Xiao, Lingling Wang, Zhiqiang Tang, Xueqiao Qian, Jian Wang, Yingli Lian, Jiayi Tang, Jiarou Xu, Ying Chih Lin, Baojun Shi, Pan Xu, Qiongsi Xiong

This study shows that fermented Chinese medicine (FCM) improves piglet growth and health by increasing lactic acid and propionic acid levels and altering gut microbiota composition.

PLoS ONE · Oct 21, 2024Peer-reviewedMicrobiology

PhyGCN: Pre-trained Hypergraph Convolutional Neural Networks with Self-supervised Learning

Yihe Deng, Ruochi Zhang, Pan Xu, Jian Ma, Quanquan Gu

PhyGCN improves node representations in hypergraphs using self-supervised learning and variable hyperedge sizes, showing effectiveness on chromatin interactions and polypharmacy side-effects.

bioRxiv · Oct 1, 2023 · PreprintBioinformatics