Author

Patrick S Stumpf

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Cell Biology· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:cell type annotation· 2 Approach:experimental assay· 2 Organism:mouse· 2 Approach:statistical model· 2 Research Focus:cell signaling & trafficking· 1 Research Focus:differential expression· 1 Assay:fluorescence / live-cell microscopy· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Ben D MacArthur· 2 shared Aaron Sim· 1 shared Heather Harrington· 1 shared Rob Ewing· 1 shared Rosanna C G Smith· 1 shared Sarah Filippi· 1 shared Sonya J Ridden· 1 shared

Activity by Year

2016-2016 · peak 2/yr

Co-Author Collaboration Network

7 top collaborators · 16 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersSystems Biology

Ben D MacArthur

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Single Cell Pluripotency Regulatory Networks

Patrick S Stumpf, Rob Ewing, Ben D MacArthur

The paper discusses reconstructing regulatory networks in individual ES cells using single-cell transcriptomics and proteomics to understand pluripotency and cell-cell variability.

bioRxiv · Jul 6, 2016Systems Biology

Nanog fluctuations in ES cells highlight the problem of measurement in cell biology

Rosanna C G Smith, Patrick S Stumpf, Sonya J Ridden, Aaron Sim, Sarah Filippi, Heather Harrington, Ben D MacArthur

The paper shows that genetic reporters for Nanog can distort its dynamics in ES cells, leading to misleading results about pluripotency regulation.

bioRxiv · Jun 28, 2016Cell Biology