Author

Perla Cota

Helmholtz Munich

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Developmental Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Approach:experimental assay· 2 Organism:mouse· 2 Research Focus:cell-cell communication· 1 Assay:CITE-seq· 1 Research Focus:differential expression· 1 Assay:imaging· 1 Research Focus:imputation· 1

Frequent Co-Authors

Aimée Bastidas-PonceiD· 2 shared Fabian Joachim TheisiD· 2 shared Heiko LickertiD· 2 shared Marta Tarquis-MedinaiD· 2 shared Mostafa BakhtiiD· 2 shared Changying JingiD· 1 shared Ciro SalinnoiD· 1 shared Dominik KleiniD· 1 shared

Activity by Year

2022-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 39 mutual co-author links

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2 shared papersBioinformatics

Aimée Bastidas-PonceORCID

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2 papers

Recent·Most cited

Mapping cells through time and space with moscot

Dominik Klein, Giovanni Palla, Marius Lange, Michal Klein, Zoe Piran, Manuel Gander, Laetitia Meng-Papaxanthos, Michael Sterr, Lama Saber, Changying Jing, Aimée Bastidas-Ponce, Perla Cota, Marta Tarquis-Medina, Shrey Parikh, Ilan Gold, , Fabian Joachim Theis

moscot unifies optimal transport for temporal, spatial and spatiotemporal single-cell mapping, using multimodal cost spaces and low-rank solvers to scale to 1.7 million mouse embryo cells.

Nature · Jan 22, 2025Peer-reviewedBioinformatics✦ In-depth digest

Synaptotagmin 13 orchestrates pancreatic endocrine cell egression and islet morphogenesis

Mostafa Bakhti, Aimée Bastidas-Ponce, Sophie Tritschler, Oliver Czarnecki, Marta Tarquis-Medina, Eva Nedvedova, Jessica Jaki, Stefanie Julia Willmann, Katharina Scheibner, Perla Cota, Ciro Salinno, Karsten Boldt, Nicola Horn, Marius Ueffing, Ingo Burtscher, , Heiko Lickert

This study identifies Synaptotagmin 13 as a key regulator of endocrine cell egression and islet formation through its role in cell polarity and basement membrane remodeling.

Nature Communications · Aug 4, 2022Peer-reviewedDevelopmental Biology