Author

Pieter-Jan Volders

Harvard University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Assay:DNA methylation· 2 Assay:bulk RNA-seq· 1 Assay:ChIP-seq· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1

Frequent Co-Authors

Chiara GerhardingeriD· 1 shared Dries RombautiD· 1 shared Francisco Avila CobosiD· 1 shared James Christopher LeeiD· 1 shared Jasper AnckaertiD· 1 shared Jo VandesompeleiD· 1 shared John L. RinniD· 1 shared Kaia MattioliiD· 1 shared

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2016-2019 · peak 1/yr

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1 shared paperGenomics

Chiara GerhardingerORCID

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2 papers

Recent·Most cited

GenomicsGenome ResearchPeer-reviewedMar 1, 2019

High-throughput functional analysis of lncRNA core promoters elucidates rules governing tissue-specificity

Kaia Mattioli, Pieter-Jan Volders, Chiara Gerhardinger…·John L. Rinn

The paper uses computational methods and MPRA to analyze lncRNA and mRNA promoters, finding that divergent promoters have higher transcriptional activity and lower tissue-specificity, while lincRNAs and eRNAs are more tissue-specific with simpler TF motif profiles.

1 citation

humanDNA methylation

BioinformaticsbioRxivSep 23, 2016

Zipper plot: visualizing transcriptional activity of genomic regions

Francisco Avila Cobos, Jasper Anckaert, Pieter-Jan Volders…·Pieter Mestdagh

The paper introduces Zipper plot, a tool to visualize transcriptional activity around TSSs using RNA-seq and other genomic data.

DOI 10.1186/s12859-017-1651-7

bulk RNA-seqChIP-seq