Author

R. Laubenbacher

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 2 Immunology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Organism:human· 2 Organism:bacteria (other)· 1 Assay:bulk RNA-seq· 1 Research Focus:cell signaling & trafficking· 1 Research Focus:cell-cell communication· 1 Research Focus:chromatin & epigenetic regulation· 1 Approach:deep learning· 1

Frequent Co-Authors

P. Mendes· 2 shared A. Dongari-Bagtzoglou· 1 shared A. Knapp· 1 shared A. Thompson· 1 shared B. Adhikari· 1 shared B. Helba· 1 shared B. Mehrad· 1 shared C. Atkinson· 1 shared

Activity by Year

2018-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 19 mutual co-author links

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2 shared papersMicrobiology

P. Mendes

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Computational modeling of macrophage iron sequestration during host defense against Aspergillus

B. Adhikari, Y. Scindia, L. Sordo Vieira, H. de Assis Lopes Ribeiro, J. Masison, N. Yang, L. Fonseca, M. Wheeler, A. Knapp, Y. Mei, B. Helba, C. Atkinson, W. Schroeder, B. Mehrad, R. Laubenbacher

The paper develops a computational model of macrophage iron sequestration during Aspergillus infection, showing that transferrin receptor-1 upregulation precedes inflammatory cytokine induction.

bioRxiv · Jan 24, 2022Immunology

Understanding Lactobacillus paracasei and Streptococcus oralis biofilm interactions through agent-based modeling

L. Archambault, S. Koshy-Chenthittayil, A. Thompson, A. Dongari-Bagtzoglou, R. Laubenbacher, P. Mendes

This paper uses agent-based modeling and experiments to study interactions between Lactobacillus paracasei and Streptococcus oralis in biofilms, finding that L. paracasei may inhibit S. oralis growth.

bioRxiv · Apr 29, 2021Microbiology

An important role for periplasmic storage in Pseudomonas aeruginosa copper homeostasis revealed by a combined experimental and computational modeling study

J. H. Parmar, J. Quintana, D. Ramirez, R. Laubenbacher, J. M. Argüello, P. Mendes

The paper combines experimental and computational modeling to reveal a periplasmic copper storage mechanism in Pseudomonas aeruginosa that is critical for copper homeostasis under dyshomeostasis conditions.

bioRxiv · Jul 13, 2018Microbiology