Author

Rafael Lopez-Goncalvez

Centre National de la Recherche Scientifique

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Bioinformatics· 1

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Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Assay:CRISPR screen· 1 Research Focus:differential expression· 1 Organism:human· 1 Approach:machine learning (classical)· 1 Assay:scRNA-seq· 1 Approach:statistical model· 1

Frequent Co-Authors

Bernard P. MariiD· 1 shared Caroline LacouxiD· 1 shared Cédric Girard-Riboulleau· 1 shared Cyprien GilleiD· 1 shared Georges VassauxiD· 1 shared Iris ManosalvaiD· 1 shared Julien Fassy· 1 shared Kévin LebrigandiD· 1 shared

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2024-2024 · peak 1/yr

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1 shared paperBioinformatics

Bernard P. MariORCID

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1 paper

Recent·Most cited

A workflow combining single-cell CRISPRi screening and a Sparse supervised autoencoder neural network to detect subtle transcriptomic perturbations induced by lncRNA Knock-Down

Marin Truchi, Caroline Lacoux, Cyprien Gille, Julien Fassy, Virginie Magnone, Rafael Lopez-Goncalvez, Cédric Girard-Riboulleau, Iris Manosalva, Marine Gautier‐Isola, Kévin Lebrigand, Pascal Barbry, Salvatore Spicuglia, Georges Vassaux, Roger Rezzonico, Michel Barlaud, Bernard P. Mari

The paper develops a Sparse supervised autoencoder to detect subtle transcriptomic changes from CRISPRi screens of lncRNAs in lung cancer cells under hypoxia.

Frontiers in Bioinformatics · Mar 4, 2024Peer-reviewedBioinformatics