Author
Cold Spring Harbor Laboratory
Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.
4 papers
Recent·Most cited
Xin Zeng, Gilad Barshad, Rebecca Hassett…·Yixin Zhao
The paper introduces a model-based framework to compare promoter-proximal pausing dynamics across biological contexts, revealing kinetic and distributional variations in pausing.
Adam C. Siepel, Rebecca Hassett, Stephen J. Staklinski
This paper introduces a variational inference method for Bayesian phylogenetic reconstruction, showing faster speeds than traditional Bayesian methods on real-world datasets.
Stephen J. Staklinski, Armin Scheben, Lise M. Brault…·Adam C. Siepel
This paper introduces BEAM, a Bayesian framework for inferring tissue migration histories in metastatic cancer from lineage tracing data, showing improved performance over existing methods.
Yixin Zhao, Lingjie Liu, Rebecca Hassett, Adam C. Siepel
The paper develops a probabilistic model to estimate transcription initiation and pause-escape rates from nascent RNA sequencing data, showing pause-escape is often more rate-limiting than previously thought.