Author

S. Commichaux

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3

Signature Assays, Organisms & Methods

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Assay:metagenomics· 3 Approach:experimental assay· 2 Research Focus:cell type annotation· 1 Research Focus:ecology & biodiversity· 1 Research Focus:host-pathogen & immune response· 1 Organism:human· 1 Approach:statistical model· 1

Frequent Co-Authors

A. Ottesen· 2 shared E. Reed· 2 shared P. F. McDermott· 2 shared P. Ramachandran· 2 shared A. Merrill· 1 shared B. J. Kocurek· 1 shared B. Kocurek· 1 shared B. M. Flannery· 1 shared

Activity by Year

2021-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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2 shared papersMicrobiology

A. Ottesen

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Author profile →

3 papers

Recent·Most cited

Paired metagenomic and chemical evaluation of an aflatoxin contaminated dog kibble

A. Ottesen, B. J. Kocurek, E. Reed, S. Commichaux, M. K. Mammel, P. Ramachandran, P. F. McDermott, B. M. Flannery, E. A. Strain

The paper evaluates aflatoxin-contaminated dog kibble using paired metagenomic and chemical data to correlate fungal DNA abundance with toxin levels.

bioRxiv · Feb 14, 2024Microbiology

Advancing antimicrobial resistance monitoring in surface waters with metagenomic and quasimetagenomic methods

A. Ottesen, B. Kocurek, P. Ramachandran, E. Reed, S. Commichaux, G. Engelbach, M. Mammel, S. Saint Fleurant, S. Zhao, C. Kabera, A. Merrill, N. Bonin, H. Worley, N. Noyes, C. Boucher, , E. Strain

This study compares metagenomic and quasimetagenomic methods to detect antimicrobial resistance genes in surface waters, showing quasimetagenomic data identifies significantly more resistance determinants.

bioRxiv · Apr 22, 2022Microbiology

Paraoxonase and acylated homoserine lactones in urine from patients with urinary tract infections--relationship to microbial diversity by 16S rRNA gene sequencing

J. E. Lafleur, J. S. Meisel, S. Commichaux, R. L. E. Amdur, M. Pop, M. W. Silby

The paper investigates the relationship between paraoxonase (PON1) and acylated homoserine lactones (AHLs) in urine from urinary tract infection (UTI) patients, linking PON1 presence to microbial diversity via 16S rRNA sequencing.

bioRxiv · Jun 10, 2021 · PreprintMicrobiology