Author

S. Evoli

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biochemistry· 2 Biophysics· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Approach:deep learning· 2 Organism:human· 2 Research Focus:protein folding & dynamics· 2 Assay:proteomics· 2 Research Focus:cell type annotation· 1 Research Focus:chromatin & epigenetic regulation· 1 Assay:DNA methylation· 1

Frequent Co-Authors

J. Wereszczynski· 2 shared B. Rizzuti· 1 shared C. A. Musselman· 1 shared D. Mobley· 1 shared J. C. Sanchez· 1 shared J. L. Nitiss· 1 shared K. C. Nitiss· 1 shared L. Yu· 1 shared

Activity by Year

2016-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 19 mutual co-author links

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2 shared papersBiophysics

J. Wereszczynski

Mutual co-authors in cluster

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3 papers

Recent·Most cited

Modeling Allosteric Mechanisms of Eukaryotic Type II Topoisomerases

S. Evoli, N. L. Kariyawasam, K. C. Nitiss, J. L. Nitiss, J. Wereszczynski

This study uses molecular dynamics simulations to investigate how nucleotide binding and hydrolysis regulate the allosteric mechanisms of yeast TopoII and how mutations affect these processes.

bioRxiv · Aug 2, 2023Biophysics

The Molecular Basis of Specific DNA Binding by the BRG1 AT-hook and Bromodomain

J. C. Sanchez, L. Zhang, S. Evoli, N. J. Schnicker, M. Nunez-Hernandez, L. Yu, J. Wereszczynski, M. A. Pufall, C. A. Musselman

This study identifies the DNA specificity and structural basis of BRG1's composite domain using SELEX-seq, NMR, and modeling, showing how cancer mutations alter DNA binding.

bioRxiv · Nov 25, 2019Biochemistry

Multiple binding modes of ibuprofen in human serum albumin identified by absolute binding free energy calculations

S. Evoli, D. Mobley, R. Guzzi, B. Rizzuti

This paper uses absolute binding free energy calculations to predict ibuprofen's binding modes, affinity, and protonation state in human serum albumin, revealing new binding sites and confirming known ones.

bioRxiv · Aug 8, 2016Biochemistry