Author

S. F. S. Ho

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Microbiology· 2

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:metagenomics· 2 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Approach:experimental assay· 1 Research Focus:host-pathogen & immune response· 1

Frequent Co-Authors

W. van Schaik· 2 shared A. D. Millard· 1 shared I. T. Alam· 1 shared J. D. Clemens· 1 shared M. H. uz-Zaman· 1 shared M. S. Islam· 1 shared N. Wheeler· 1 shared R. A. Moran· 1 shared

Activity by Year

2021-2021 · peak 2/yr

Co-Author Collaboration Network

9 top collaborators · 24 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersMicrobiology

W. van Schaik

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Gauge your phage: Benchmarking of bacteriophage identification tools in metagenomic sequencing data

S. F. S. Ho, N. Wheeler, A. D. Millard, W. van Schaik

This study benchmarks ten phage identification tools on metagenomic data, finding VirSorter2 and Kraken2 perform best, with false positives and diversity bias noted.

bioRxiv · Apr 12, 2021 · PreprintMicrobiology

Microbiota analysis of rural and urban surface waters and sediments in Bangladesh identifies human waste as driver of antibiotic resistance

R. S. McInnes, M. H. uz-Zaman, I. T. Alam, S. F. S. Ho, R. A. Moran, J. D. Clemens, M. S. Islam, W. van Schaik

The paper analyzes antibiotic resistance genes in surface waters and sediments from rural and urban areas in Bangladesh, finding that urban areas have higher levels of resistance genes linked to human gut bacteria.

bioRxiv · Feb 4, 2021Microbiology