Author

S. Fanning

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Microbiology· 4

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:bulk RNA-seq· 2 Organism:E. coli· 2 Approach:experimental assay· 2 Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Organism:bacteria (other)· 1 Research Focus:database / resource· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

S. Devineau· 2 shared S. K. Sivasankaran· 2 shared S. Nguyen· 2 shared S. Srikumar· 2 shared Y. Cao· 2 shared A. Bhargava· 1 shared A. Eshwar· 1 shared A. Lehner· 1 shared

Activity by Year

2019-2021 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 26 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersMicrobiology

S. Devineau

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

A study of the correlation between phenotypic antimicrobial susceptibility testing methods and the associated genotypes determined by whole genome sequencing for a collection of Escherichia coli of bovine origin

T. J. Maunsell, S. Nguyen, F. El Garach, C. Miossec, E. Cuinet, F. Woehrle, S. Fanning, D. A. Niedziela

This study correlates whole genome sequencing with antimicrobial susceptibility testing in bovine Escherichia coli, finding strong agreement for some antibiotics but suggesting MIC measurements may be needed for intermediate resistance cases.

bioRxiv · Jul 16, 2021 · PreprintMicrobiology

Silver nanoparticles induce a triclosan-like antibacterial action mechanism in multi-drug resistant Klebsiella pneumoniae

V. Pareek, S. Devineau, S. K. Sivasankaran, A. Bhargava, J. Panwar, S. Srikumar, S. Fanning

This study shows silver nanoparticles induce a triclosan-like antibacterial mechanism in multi-drug resistant Klebsiella pneumoniae by inhibiting fatty acid biosynthesis and causing oxidative stress.

bioRxiv · Oct 24, 2020Microbiology

Analysis of the oxidative stress regulon identifies soxS as a genetic target for resistance reversal in multi-drug resistant Klebsiella pneumoniae

J. Anes, K. Dever, A. Eshwar, S. Nguyen, Y. Cao, S. K. Sivasankaran, S. Sakalauskaite, A. Lehner, S. Devineau, R. Daugelavicius, S. Fanning, S. Srikumar

This study identifies soxS as a genetic target for reversing multi-drug resistance in K. pneumoniae by analyzing its oxidative stress regulon and demonstrating its role in efflux pump regulation and tetracycline susceptibility.

bioRxiv · Aug 21, 2020Microbiology

Yersinia canariae sp. nov., isolated from a human yersiniosis case

S. V. Nguyen, D. Greig, D. Hurley, Y. Cao, E. McCabe, M. Mitchell, C. Jenkins, S. Fanning

The paper describes the isolation and genomic characterization of a novel Yersinia species from a human yersiniosis case.

bioRxiv · Oct 18, 2019Microbiology