Author

S. Lyalina

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 3 Assay:metagenomics· 3 Organism:mouse· 2 Approach:statistical model· 2 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1

Frequent Co-Authors

K. S. Pollard· 2 shared S. Sanjabi· 2 shared A. L. Byrd· 1 shared B. Charbit· 1 shared C. Armour· 1 shared C. Gaulke· 1 shared D. Duffy· 1 shared D. R. Nagarkar· 1 shared

Activity by Year

2017-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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2 shared papersMicrobiology

K. S. Pollard

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3 papers

Recent·Most cited

Single cell genome sequencing of laboratory mouse microbiota improves taxonomic and functional resolution of this model microbial community

S. Lyalina, R. Stepanauskas, F. Wu, S. Sanjabi, K. S. Pollard

The paper uses single-cell genome sequencing of mouse stool to improve taxonomic and functional resolution of the mouse gut microbiome by identifying novel species and enhancing metagenomic analysis.

bioRxiv · Dec 13, 2021Microbiology

Stability and dynamics of the human gut microbiome and its association with systemic immune traits

A. L. Byrd, M. Liu, K. E. Fujimura, S. Lyalina, D. R. Nagarkar, B. Charbit, E. Patin, O. J. Harrison, L. Quintana-Murci, D. Duffy, M. L. Albert, The Milieu Interieur Consortium

The paper analyzes gut microbiome data from 946 donors to show age-related changes in bacterial profiles and links them to immune traits, supporting personalized microbial therapeutics.

bioRxiv · Jan 17, 2020Microbiology

Development of Inflammatory Bowel Disease is Linked to a Longitudinal Restructuring of the Gut Metagenome in Mice

T. J. Sharpton, S. Lyalina, J. Luong, J. Pham, E. M. Deal, C. Armour, C. Gaulke, S. Sanjabi, K. S. Pollard

This study uses longitudinal metagenomic analysis in a mouse model of IBD to identify microbial functional changes linked to disease progression and immune activation.

bioRxiv · Aug 10, 2017Microbiology