Author

S. P. Presse

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 2

Signature Assays, Organisms & Methods

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Approach:Bayesian inference· 2 Organism:E. coli· 1 Assay:fluorescence / live-cell microscopy· 1 Research Focus:gene regulatory network inference· 1 Research Focus:imputation· 1 Assay:scRNA-seq· 1 Organism:yeast· 1

Frequent Co-Authors

D. P. Shepherd· 2 shared A. Saurabh· 1 shared C. Kural· 1 shared C. Moyer· 1 shared C. Thompson· 1 shared J. S. Bryan· 1 shared M. C. Schweiger· 1 shared P. T. Brown· 1 shared

Activity by Year

2022-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersBiophysics

D. P. Shepherd

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2 papers

Recent·Most cited

Approaching Maximum Resolution in Structured Illumination Microscopy via Accurate Noise Modeling

A. Saurabh, P. T. Brown, J. S. Bryan, Z. R. Fox, R. Kruithoff, C. Thompson, C. Kural, D. P. Shepherd, S. P. Presse

This paper introduces B-SIM, an unsupervised Bayesian framework for structured illumination microscopy that improves resolution and contrast by accurately modeling noise, outperforming existing methods in both simulated and experimental data.

npj Imaging · Jan 31, 2025Peer-reviewedBiophysics

Inferring gene expression models from snapshot RNA data

C. Moyer, Z. Kilic, M. C. Schweiger, D. P. Shepherd, S. P. Presse

The paper introduces a Bayesian nonparametric method to infer gene networks from single-cell RNA data by simultaneously learning gene states, connectivities, and rate parameters.

bioRxiv · May 28, 2022 · PreprintBiophysics