Author

C. Thompson

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 3 Ecology· 2 Microbiology· 2 Immunology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 4 Research Focus:host-pathogen & immune response· 3 Research Focus:cell signaling & trafficking· 2 Research Focus:ecology & biodiversity· 2 Assay:fluorescence / live-cell microscopy· 2 Organism:bacteria (other)· 1 Approach:Bayesian inference· 1 Organism:C. elegans· 1

Frequent Co-Authors

C. Kural· 2 shared A. A. Akatay· 1 shared A. B. Eason· 1 shared A. Bailey· 1 shared A. Hsiao· 1 shared A. Juarez· 1 shared A. Piazza· 1 shared A. Saurabh· 1 shared

Activity by Year

2020-2023 · peak 4/yr

Co-Author Collaboration Network

10 top collaborators · 9 mutual co-author links

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2 shared papersBiophysics

C. Kural

Mutual co-authors in cluster

Author profile →

8 papers

Recent·Most cited

Approaching Maximum Resolution in Structured Illumination Microscopy via Accurate Noise Modeling

A. Saurabh, P. T. Brown, J. S. Bryan, Z. R. Fox, R. Kruithoff, C. Thompson, C. Kural, D. P. Shepherd, S. P. Presse

This paper introduces B-SIM, an unsupervised Bayesian framework for structured illumination microscopy that improves resolution and contrast by accurately modeling noise, outperforming existing methods in both simulated and experimental data.

bioRxiv · Dec 7, 2023Biophysics

A highly resolved network reveals the role of terrestrial herbivory in structuring aboveground food webs

K. R. S. Hale, J. D. Curlis, G. G. Auteri, S. Bishop, R. L. K. French, L. E. Jones, K. L. Mills, M. Simons, B. G. Scholtens, C. Thompson, J. Tourville, F. S. Valdovinos

The paper constructs a high-resolution terrestrial aboveground food web revealing unique structural properties of herbivory and carnivory interactions.

bioRxiv · Oct 5, 2023Ecology

Serial Lift-Out - Sampling the Molecular Anatomy of Whole Organisms

O. H. Schioetz, C. J. O. Kaiser, S. Klumpe, D. R. Morado, M. Poege, J. Schneider, F. Beck, C. Thompson, J. M. Plitzko

This paper introduces Serial Lift-Out, a technique that improves sample preparation for cryo-ET, enabling the study of multicellular molecular anatomy in C. elegans.

bioRxiv · Apr 28, 2023Biophysics

Microbiome induced complement synthesized in the gut protects against enteric infections

M. Wu, W. Zheng, X. Song, B. Bao, Y. Wang, D. Ramanan, D. Yang, R. Liu, J. C. Macbeth, E. A. Do, W. A. Andrade, T. Yang, H.-S. Cho, F. S. Gazzaniga, M. Ilves, , D. L. Kasper

The paper shows gut microbiota regulate complement component 3 (C3) production in humans and mice, with intestinal C3 levels correlating with protection against enteric infections.

bioRxiv · Feb 2, 2023 · PreprintImmunology

Plasmid manipulation of bacterial behaviour through translational regulatory crosstalk

C. Thompson, J. Hall, G. Chandra, C. Martins, G. Saalbach, S. Bird, S. Ford, R. Little, A. Piazza, E. Harrison, R. Jackson, M. Brockhurst, J. Malone

This paper identifies RsmQ as a plasmid translational regulator that globally controls bacterial behavior by altering the proteome, leading to a switch from motile to sessile lifestyle.

bioRxiv · Jun 27, 2022 · PreprintMicrobiology

Endocytosis at Extremes: Formation and Internalization of Giant Clathrin-coated Pits Under Elevated Membrane Tension

A. A. Akatay, T. Wu, U. Djakbarova, C. Thompson, E. Cocucci, R. Zandi, J. Rudnick, C. Kural

This study shows that elevated membrane tension induces the formation of giant clathrin-coated pits (GCPs) in fruit fly embryos, which differ in size and internalization dynamics from canonical clathrin-coated pits.

bioRxiv · Jun 7, 2022Biophysics

High-density amplicon sequencing identifies community spread and ongoing evolution of SARS-CoV-2 in the Southern United States

R. P. McNamara, C. Caro-Vegas, J. T. Landis, R. Moorad, L. J. Pluta, A. B. Eason, C. Thompson, A. Bailey, F. C. S. Villamor, P. T. Lange, J. P. Wong, T. Seltzer, J. Seltzer, Y. Zhou, W. Vahrson, , D. Dittmer

This study uses high-density amplicon sequencing to show ongoing SARS-CoV-2 evolution and community spread in a Southern U.S. suburban area, identifying the D614G variant as dominant.

bioRxiv · Jun 19, 2020Microbiology

Abundance and Distribution of Heterelmis cf. glabra (Coleoptera: Elmidae) within Dolan Falls Preserve and the Devils River State Natural Area, Texas, USA

P. H. Diaz, J. R. Gibson, C. Norris, C. Thompson

This study assesses the abundance and distribution of Heterelmis cf. glabra in springs within two Texas preserves using N-mixture models and examines habitat associations.

bioRxiv · Feb 10, 2020 · PreprintEcology