Author

S. S. Shinde

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 4

Signature Assays, Organisms & Methods

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Research Focus:chromatin & epigenetic regulation· 2 Approach:experimental assay· 2 Organism:mouse· 2 Organism:rat· 2 Research Focus:benchmarking· 1 Research Focus:cell signaling & trafficking· 1 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1

Frequent Co-Authors

N. Vijay· 3 shared L. Teekas· 2 shared S. Sharma· 2 shared A. B. Patil· 1 shared A. Patwardhan· 1 shared A. Sharma· 1 shared K. CG· 1 shared M. Watve· 1 shared

Activity by Year

2019-2021 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

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3 shared papersEvolutionary Biology

N. Vijay

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4 papers

Recent·Most cited

Recurrent erosion of COA1/MITRAC15 demonstrates gene dispensability in oxidative phosphorylation

S. S. Shinde, S. Sharma, L. Teekas, A. Sharma, N. Vijay

The paper shows recurrent gene loss and structural changes in COA1/MITRAC15 in species with glycolytic muscle fiber dominance, linking it to oxidative phosphorylation dispensability.

bioRxiv · Jun 9, 2021Evolutionary Biology

The ratio versus difference optimization and its implications for optimality theory

S. S. Shinde, A. Patwardhan, M. Watve

The paper compares ratio and difference optimization models, identifying conditions under which each is appropriate and applies them to various biological and economic examples.

bioRxiv · Dec 15, 2020Evolutionary Biology

CoalQC - Quality control while inferring demographic histories from genomic data: Application to forest tree genomes

A. B. Patil, S. S. Shinde, R. S, S. B. N, K. CG, N. Vijay

The paper introduces CoalQC, a pipeline for quality control in genomic data to improve demographic history inference, showing that assembly quality and repeat regions affect results in forest trees.

bioRxiv · Mar 3, 2020Evolutionary Biology

Signatures of relaxed selection in the CYP8B1 gene of birds and mammals

S. S. Shinde, L. Teekas, S. Sharma, N. Vijay

The paper screens CYP8B1 gene sequences across 200+ species to identify relaxed selection linked to dietary changes in birds and mammals.

bioRxiv · Jul 24, 2019Evolutionary Biology