Author

S. Tomkovich

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3 Scientific Communication & Education· 1

Signature Assays, Organisms & Methods

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Organism:mouse· 3 Approach:experimental assay· 2 Research Focus:host-pathogen & immune response· 2 Assay:metagenomics· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:software / tool· 1 Approach:statistical model· 1

Frequent Co-Authors

P. D. Schloss· 4 shared L. Bishop· 3 shared N. A. Lesniak· 3 shared A. Taylor· 2 shared J. Colovas· 2 shared K. McBride· 2 shared A. Henry· 1 shared C. Barnier· 1 shared

Activity by Year

2020-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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4 shared papersMicrobiology

P. D. Schloss

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Simplified fecal community transplant restores Clostridioides difficile colonization resistance to antibiotic perturbed murine communities

N. A. Lesniak, S. Tomkovich, A. Henry, A. Taylor, J. Colovas, L. Bishop, K. McBride, P. D. Schloss

This study shows that a simplified fecal community transplant can restore colonization resistance to antibiotic-perturbed murine gut communities, preventing Clostridioides difficile colonization depending on the community structure.

bioRxiv · May 11, 2022 · PreprintMicrobiology

An osmotic laxative renders mice susceptible to prolonged Clostridioides difficile colonization and hinders clearance

S. Tomkovich, A. Taylor, J. King, J. Colovas, L. Bishop, K. McBride, S. Royzenblat, N. A. Lesniak, I. L. Bergin, P. D. Schloss

This study shows that PEG laxative treatment in mice increases susceptibility to C. difficile colonization and delays clearance.

bioRxiv · Jul 13, 2021Microbiology

Developing and deploying an integrated workshop curriculum teaching computational skills for reproducible research

Z. Lapp, K. L. Sovacool, N. A. Lesniak, D. King, C. Barnier, M. Flickinger, J. Krüger, C. R. Armour, M. M. Lapp, J. Tallant, R. Diao, M. Oneka, S. Tomkovich, J. M. Anderson, S. K. Lucas, P. D. Schloss

The paper develops a two-day workshop curriculum for teaching reproducible research using R, Unix, git, and GitHub, addressing content overload and integration challenges in existing curricula.

bioRxiv · Jun 15, 2021Scientific Communication & Education

The initial gut microbiota and response to antibiotic perturbation influence Clostridioides difficile colonization in mice

S. Tomkovich, J. M. A. Stough, L. Bishop, P. D. Schloss

This study shows that initial gut microbiota composition and response to antibiotic perturbation affect C. difficile colonization in mice from different sources.

bioRxiv · Aug 27, 2020Microbiology