Author

Sanghyun Kim

The University of Sydney

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2 Cancer Biology· 1

Signature Assays, Organisms & Methods

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Approach:benchmark study· 2 Research Focus:benchmarking· 2 Research Focus:cancer & tumor microenvironment· 1 Approach:experimental assay· 1 Organism:human· 1 Assay:proteomics· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Jean Yee Hwa YangiD· 2 shared Marni Torkel· 2 shared Yue CaoiD· 2 shared Agata Sekrecka· 1 shared Angela H. TingiD· 1 shared Cristian A. Otero-Perez· 1 shared Dario StrbenaciD· 1 shared Dung‐Fang LeeiD· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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2 shared papersBioinformatics

Jean Yee Hwa YangORCID

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3 papers

Recent·Most cited

BenchHub enables an inclusive and transparent ecosystem for community-focused benchmarking in computational biology

Xiaoqi Liang, Nick Robertson, Marni Torkel, Sanghyun Kim, Dario Strbenac, Yue Cao, Jean Yee Hwa Yang

BenchHub provides a modular ecosystem for community-focused benchmarking in computational biology by linking datasets, metrics, and ground truth to improve reproducibility and sustainability.

Genome biology · Sep 9, 2026Peer-reviewedBioinformatics

A TP53 Intron-Derived Peptide Promotes Tumor Survival

Louis A. Cadena, Kevin Lee Luo, Sofia M. Fernandez, Cristian A. Otero-Perez, Yuwen Huang, Ruiying Zhao, Dung‐Fang Lee, Angela H. Ting, Xin Hu, Agata Sekrecka, Michal Sekrecki, Sydney X. Lu, Sanghyun Kim, Fengxi Ye, Mingjian James You, Shih‐Han Lee

The paper identifies an intronic APA-derived protein, IPADP1, that promotes cancer cell survival and tumor formation in leukemia.

bioRxiv · Sep 4, 2025 · PreprintCancer Biology

The current landscape and emerging challenges of benchmarking single-cell methods

Yue Cao, Lijia Yu, Marni Torkel, Sanghyun Kim, Yingxin Lin, Pengyi Yang, Terence Paul Speed, Shila Ghazanfar, Jean Yee Hwa Yang

This paper benchmarks single-cell methods by analyzing 282 papers, highlighting challenges in combining benchmarking studies and preventing fatigue.

Briefings in Bioinformatics · Aug 31, 2025Peer-reviewedBioinformatics