Author

Segun C. Jung

Argonne National Laboratory

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2 Genomics· 1

Signature Assays, Organisms & Methods

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Organism:human· 3 Approach:statistical model· 3 Research Focus:database / resource· 2 Assay:DNA methylation· 2 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Assay:ChIP-seq· 1

Frequent Co-Authors

Ben HeavneriD· 2 shared Carl KesselmaniD· 2 shared Cory C. FunkiD· 2 shared Gustavo GlusmaniD· 2 shared Ian T FosteriD· 2 shared Kyle ChardiD· 2 shared Matthew A. Richards· 2 shared Nathan D. PriceiD· 2 shared

Activity by Year

2019-2020 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersBioinformatics

Ben HeavnerORCID

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Author profile →

3 papers

Recent·Most cited

Mendelian randomization identifies folliculin expression as a mediator of diabetic retinopathy.

Andrew D. Skol, Segun C. Jung, Ana Marija Sokovic, Siquan Chen, Sarah Fazal, Olukayode Ayodeji Sosina, Poulami P Borkar, Amy Lin, Maria S. Sverdlov, Dingcai Cao, Anand Swaroop, Ionut Bebu, DCCT/ EDIC Study group, Barbara E. Stranger, Michael A. Grassi

The paper identifies folliculin (FLCN) as a mediator of diabetic retinopathy through genetic association and gene expression analysis.

eLife · Nov 9, 2020Peer-reviewedGenomics

Atlas of Transcription Factor Binding Sites from ENCODE DNase Hypersensitivity Data Across 27 Tissue Types

Cory C. Funk, Alex M. Casella, Segun C. Jung, Matthew A. Richards, Alex Rodriguez, Paul T. Shannon, Rory Donovan-Maiye, Ben Heavner, Kyle Chard, Yukai Xiao, Gustavo Glusman, Nilüfer Ertekin‐Taner, Todd Eliot Golde, Arthur W. Toga, Leroy Hood, , Seth A. Ament

The paper develops a workflow to identify transcription factor binding sites across 27 human tissues using DNase-seq data, resulting in a comprehensive footprint atlas with high-quality predictions.

Cell Reports · Aug 1, 2020Peer-reviewedBioinformatics

Reproducible big data science: A case study in continuous FAIRness

Ravi Madduri, Kyle Chard, Mike D’Arcy, Segun C. Jung, Alexis Rodriguez, Dinanath Sulakhe, Eric W. Deutsch, Cory C. Funk, Ben Heavner, Matthew A. Richards, Paul T. Shannon, Gustavo Glusman, Nathan D. Price, Carl Kesselman, Ian T Foster

The paper presents tools for ensuring FAIRness in big biomedical data analysis through a case study on creating a transcription factor binding site atlas from ENCODE data.

PLoS ONE · Apr 11, 2019Peer-reviewedBioinformatics