Author

Shanel Tsuda

Scripps Research Institute

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Cancer Biology· 1

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Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1 Organism:human· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Arantxa Romero-Toledo· 1 shared Ebba K. BlomqvistiD· 1 shared James M. BurkeiD· 1 shared Marianna Franco· 1 shared Michalina JaniszewskaiD· 1 shared Oszkar Szentirmai· 1 shared Roberto Salatino· 1 shared Yi WangiD· 1 shared

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2025-2025 · peak 1/yr

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8 top collaborators · 28 mutual co-author links

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1 shared paperCancer Biology

Arantxa Romero-Toledo

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1 paper

Recent·Most cited

Cell sorting based on single nucleotide variation enables characterization of mutation-dependent transcriptome and chromatin states.

Roberto Salatino, Marianna Franco, Arantxa Romero-Toledo, Ebba K. Blomqvist, Yi Wang, Shanel Tsuda, James M. Burke, Oszkar Szentirmai, Michalina Janiszewska

The paper develops STAR-FACS to sort cells by SNVs and shows distinct transcriptomes in glioblastoma cells with different TERT promoter mutations.

Nucleic Acids Research · Jul 31, 2025Peer-reviewedCancer Biology