Author

Susan Tonks

University of Oxford

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Genetics· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:statistical model· 2 Research Focus:batch correction / integration· 1 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Research Focus:GWAS / association mapping· 1 Assay:GWAS summary statistics· 1

Frequent Co-Authors

Abhilasha KarkeyiD· 1 shared Agus SalimiD· 1 shared Andrew John PollardiD· 1 shared Anup Adhikari· 1 shared BRUCE J. WINNEY· 1 shared Buddha BasnyatiD· 1 shared Chiea Chuen KhoriD· 1 shared Christiane DolecekiD· 1 shared

Activity by Year

2018-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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1 shared paperBioinformatics

Abhilasha KarkeyORCID

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2 papers

Recent·Most cited

Direct inference and control of genetic population structure from RNA sequencing data

Muhamad Fachrul, Abhilasha Karkey, Mila Shakya, Louise M. Judd, Taylor Harshegyi, Kar Seng Sim, Susan Tonks, Sabina Dongol, Rajendra Shrestha, Agus Salim, STRATAA study group, Anup Adhikari, Happy Banda, Christoph J. Blohmke, Thomas C. Darton, , Michael Inouye

This paper introduces RGStraP, a tool to infer genetic population structure from RNAseq data and shows it can control for population structure in gene expression analyses.

Communications Biology · Aug 2, 2023Peer-reviewedBioinformatics

Genetic patterning in Central Eurasia: population history and pigmentation

Ellen Christine Røyrvik, Nadira Y. Yuldasheva, Susan Tonks, BRUCE J. WINNEY, Ruslan Ruzibakiev, R. Spencer Wells, Walter Fred Bodmer

The paper analyzes genetic variation in Central Eurasia to infer population history and pigmentation patterns, finding convergent evolution in skin pigmentation genes.

bioRxiv · Apr 23, 2018 · PreprintGenetics