Author

Christoph J. Blohmke

University of OxfordORCID 0000-0002-1453-9651Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genetics· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 3 Research Focus:differential expression· 3 Organism:human· 3 Approach:statistical model· 2 Research Focus:batch correction / integration· 1 Approach:machine learning (classical)· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Andrew John PollardiD· 3 shared Thomas C. DartoniD· 3 shared Abhilasha KarkeyiD· 2 shared Buddha BasnyatiD· 2 shared Celina JiniD· 2 shared Gordon DouganiD· 2 shared Hazel DobinsoniD· 2 shared Jennifer W HilliD· 2 shared

Activity by Year

2019-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersBioinformatics

Andrew John PollardORCID

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3 papers

Recent·Most cited

BioinformaticsCommunications BiologyPeer-reviewedAug 2, 2023

Direct inference and control of genetic population structure from RNA sequencing data

Muhamad Fachrul, Abhilasha Karkey, Mila Shakya…·Michael Inouye

This paper introduces RGStraP, a tool to infer genetic population structure from RNAseq data and shows it can control for population structure in gene expression analyses.

12 citations

humanbulk RNA-seq

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GeneticsInfection and ImmunityPeer-reviewedMar 7, 2022

Genetic Susceptibility to Enteric Fever in Experimentally Challenged Human Volunteers

Amber Barton, Jennifer W Hill, Sagida Bibi…·Andrew John Pollard

The paper identifies genetic variants and HLA types associated with susceptibility to enteric fever in human volunteers challenged with Salmonella.

11 citations

humanbulk RNA-seq

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Molecular BiologyEMBO Molecular MedicinePeer-reviewedAug 30, 2019

Diagnostic host gene signature to accurately distinguish enteric fever from other febrile diseases

Christoph J. Blohmke, Julius Müller, Malick M. Gibani…·Thomas C. Darton

The paper identifies a host gene signature using machine learning to distinguish enteric fever from other febrile diseases with high accuracy.

26 citations

humanbulk RNA-seq

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