Author

T. M. Ghaly

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 5

Signature Assays, Organisms & Methods

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Approach:experimental assay· 5 Research Focus:gene regulatory network inference· 4 Assay:metagenomics· 3 Organism:bacteria (other)· 2 Research Focus:ecology & biodiversity· 2 Research Focus:host-pathogen & immune response· 2 Research Focus:cell type annotation· 1 Research Focus:chromatin & epigenetic regulation· 1

Frequent Co-Authors

S. G. Tetu· 5 shared A. Penesyan· 3 shared M. R. Gillings· 3 shared Q. Qi· 3 shared V. Rajabal· 3 shared A. Focardi· 2 shared I. T. Paulsen· 2 shared A. Pritchard· 1 shared

Activity by Year

2021-2023 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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5 shared papersMicrobiology

S. G. Tetu

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Stratified microbial communities in Australia's only anchialine cave are taxonomically novel and drive chemotrophic energy production via coupled nitrogen-sulphur cycling

T. M. Ghaly, A. Focardi, L. D. H. Elbourne, B. Sutcliffe, B. F. Humphreys, I. T. Paulsen, S. G. Tetu

This study uses shotgun metagenomics to analyze microbial communities in Bundera Sinkhole, revealing novel taxa and chemotrophic energy production through nitrogen-sulphur cycling.

bioRxiv · Apr 3, 2023Microbiology

Plastic Leachate Exposure Drives Antibiotic Resistance and Virulence in Marine Bacterial Communities

E. J. Vlaanderen, T. M. Ghaly, L. R. Moore, A. Focardi, I. T. Paulsen, S. G. Tetu

This study shows that plastic leachate increases antibiotic resistance and virulence genes in marine bacterial communities without the presence of plastic surfaces.

bioRxiv · Feb 13, 2023Microbiology

Uncovering Bacterial Hosts of Class 1 Integrons in an Urban Coastal Aquatic Environment with a Single-Cell Fusion-Polymerase Chain Reaction Technology

Q. Qi, T. M. Ghaly, A. Penesyan, V. Rajabal, J. A. Stacey, S. G. Tetu, M. R. Gillings

The paper develops a modified epicPCR method to identify bacterial hosts of class 1 integrons in polluted coastal waters, revealing Rhizobacter as a novel host.

bioRxiv · Feb 9, 2023Microbiology

Discovery of integrons in Archaea: platforms for cross-domain gene transfer

T. M. Ghaly, S. G. Tetu, A. Penesyan, Q. Qi, V. Rajabal, M. R. Gillings

The paper identifies integrons in Archaea and demonstrates their role in facilitating horizontal gene transfer between Archaea and Bacteria.

bioRxiv · Feb 6, 2022Microbiology

Methods for the targeted sequencing and analysis of integrons and their gene cassettes from complex microbial communities

T. M. Ghaly, A. Penesyan, A. Pritchard, Q. Qi, V. Rajabal, S. G. Tetu, M. R. Gillings

This paper presents standardized methods for PCR amplification, sequencing, and validation of integron gene cassettes from complex microbial communities, demonstrating their ability to recover diverse functional elements including antibiotic resistance genes.

bioRxiv · Sep 8, 2021Microbiology