Author

Tong Xu

Nanfang Hospital

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Biology Disciplines

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Bioinformatics· 1 Developmental Biology· 1 Neuroscience· 1 Synthetic Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Approach:experimental assay· 2 Organism:human· 2 Organism:mouse· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1

Frequent Co-Authors

Binbin CheniD· 1 shared Bing Li· 1 shared Chen LiuiD· 1 shared Guo JiD· 1 shared Guojun Chen· 1 shared Guoquan Wei· 1 shared H H. CheniD· 1 shared Hao zheng· 1 shared

Activity by Year

2020-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 12 mutual co-author links

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1 shared paperSynthetic Biology

Binbin ChenORCID

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4 papers

Recent·Most cited

NEURA: A proof-carrying framework for hallucination-resistant neuroimaging automation

Jun Xie, Jing Wang, Xiumei Wu, Xinyuan Liu, Yiqi Mi, Qinjin Liu, Tong Xu, Chen Liu, H H. Chen, Guo J

NEURA automates neuroimaging workflows using a proof-carrying framework to reduce hallucination, achieving high accuracy and detecting injected errors in controlled experiments.

bioRxiv · May 21, 2026 · PreprintNeuroscience

Multi-purpose controllable protein generation via prompted language models

Zeyuan Wang, Binbin Chen, Keyan Ding, Jiawen Cao, Ming Qin, Yadan Niu, Xiang Zhuang, Xiaotong Li, Kehua Feng, Tong Xu, Ningyu Zhang, Haoran Yu, Qiang Zhang, Huajun Chen

This paper introduces PROPEND, a protein design method using prompted language models to directly control multiple properties, achieving higher functional recovery than traditional pipelines.

bioRxiv · Nov 17, 2024 · PreprintSynthetic Biology

Normalized Semi-Covariance Co-Efficiency Analysis of Spike Proteins from SARS-CoV-2 variant Omicron and Other Coronaviruses for their Infectivity and Virulence

Tong Xu, Shanyue Zhou, Jun Steed Huang, Wandong Zhang

The paper analyzes spike proteins from SARS-CoV-2 variants and other coronaviruses using Mass-Charge covariance co-efficiency to correlate with infectivity and virulence.

Archives of Clinical and Biomedical Research · Jan 1, 2023Peer-reviewedBioinformatics

LncRNA Snhg1-driven self-reinforcing regulatory network promotes cardiomyocyte cytokinesis

Mengsha Li, Hao zheng, Yijin Chen, Bing Li, Guojun Chen, Xiaoqiang Chen, Senlin Huang, Xiang He, Guoquan Wei, Tong Xu, Xiaofei Feng, Wangjun Liao, Yulin Liao, Yanmei Chen, Jianping Bin

This study identifies Snhg1 as a driver of stable cardiomyocyte cytokinesis through a positive feedback loop with c-Myc, improving cardiac function after myocardial infarction.

bioRxiv · Oct 26, 2020 · PreprintDevelopmental Biology