Author

V. V. Topkar

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biochemistry· 1 Biophysics· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Assay:ChIP-seq· 1 Research Focus:chromatin & epigenetic regulation· 1 Assay:cryo-EM· 1 Approach:deep learning· 1 Assay:DNA methylation· 1 Research Focus:protein structure prediction· 1 Assay:proteomics· 1

Frequent Co-Authors

R. Das· 2 shared W. Kladwang· 2 shared A. M. Watkins· 1 shared B. Liu· 1 shared G. Pintilie· 1 shared H. Al-Hashimi· 1 shared I. N. Zheludev· 1 shared J. D. Yesselman· 1 shared

Activity by Year

2019-2020 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersBiochemistry

R. Das

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Author profile →

2 papers

Recent·Most cited

BiochemistrybioRxivJan 7, 2020

Anomalous reverse transcription through chemical modifications in polyadenosine stretches

W. Kladwang, V. V. Topkar, B. Liu…·R. Das

The paper re-analyzes data on reverse transcriptase behavior at chemically modified polyadenosine stretches, finding near-quantitative bypass of modifications.

DOI 10.1021/acs.biochem.0c00020

DNA methylationChIP-seq

𝕏 PostBluesky

BiophysicsbioRxivJul 31, 2019

Ribosolve: Rapid determination of three-dimensional RNA-only structures

K. Kappel, K. Zhang, Z. Su…·R. Das

Ribosolve rapidly determines 3D RNA-only structures using cryo-EM, chemical mapping, and Rosetta modeling, validated by multiple benchmarks and showing high accuracy.

DOI 10.1038/s41592-020-0878-9

cryo-EMproteomics

𝕏 PostBluesky