Author

Victor J. Hanson-Smith

Verge Genomics (United States)

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:statistical model· 2 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Assay:scRNA-seq· 1 Assay:snRNA-seq· 1

Frequent Co-Authors

Andrew KottickiD· 2 shared Araks MartirosyaniD· 2 shared Katja HebestreitiD· 2 shared Sebastian GuelfiiD· 2 shared Suresh Kumar PoovathingaliD· 2 shared T. Grant BelgardiD· 2 shared Alejandro Cisterna‐GarcíaiD· 1 shared Alicia Gómez-PascualiD· 1 shared

Activity by Year

2022-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersBioinformatics

Andrew KottickORCID

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2 papers

Recent·Most cited

Unravelling cell type specific response to Parkinson's Disease at single cell resolution

Araks Martirosyan, Rizwan Ahmad Ansari, Francisco Pestana, Katja Hebestreit, Hayk A. Gasparyan, Razmik Aleksanyan, Silvia Hnatova, Suresh Kumar Poovathingal, Catherine Marneffe, Dietmar Rudolf Thal, Andrew Kottick, Victor J. Hanson-Smith, Sebastian Guelfi, William Plumbly, T. Grant Belgard, , Matthew G. Holt

The paper analyzes single-cell transcriptomics data from Parkinson's Disease patients and controls to identify cell type-specific molecular responses and pathways involved in neurodegeneration.

Molecular Neurodegeneration · Jan 20, 2024Peer-reviewedBioinformatics

Single-nucleus co-expression networks of dopaminergic neurons support iron accumulation as a plausible explanation to their vulnerability in Parkinson's disease

Alicia Gómez-Pascual, Araks Martirosyan, Katja Hebestreit, C. Mameffe, Suresh Kumar Poovathingal, T. Grant Belgard, C. A. Altar, Andrew Kottick, MG Holt, Victor J. Hanson-Smith, Alejandro Cisterna‐García, M. Mighdoll, Robert H. Scannevin, Sebastian Guelfi, Juan Antonio Botía

The paper introduces scCoExpNets and CovCoExpNets to analyze cell-type specific gene co-expression networks from single-cell RNA-seq data, identifying iron accumulation as a factor in dopaminergic neuron vulnerability in Parkinson's disease.

bioRxiv · Dec 13, 2022 · PreprintBioinformatics