Detection of PatIent-Level distances from single cell genomics and pathomics data with Optimal Transport (PILOT)
Mehdi Joodaki, Mina Shaigan, Victor Parra, Roman David Bülow, Christoph Kuppe, David Laurin Hölscher, Mingbo Cheng, James Shiniti Nagai, Michaël Goedertier, Nassim Bouteldja, Vladimı́r Tesař, Jonathan Barratt, Ian S D Roberts, Rosanna Coppo, Rafael Kramann, , Ivan G. Costa
PILOT uses optimal transport to analyze single-cell and pathomics data, detecting disease-associated samples and non-linear changes in cell populations and tissue structures.
Molecular Systems Biology · Dec 19, 2023Peer-reviewedBioinformatics