Author

Weichen Wu

Sun Yat-sen University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Approach:deep learning· 1 Research Focus:phylogenetics / evolution· 1 Assay:protein sequence· 1 Approach:transformer / foundation model· 1 Organism:virus· 1

Frequent Co-Authors

Deyin GuoiD· 1 shared Edward Charles HolmesiD· 1 shared Guirong XueiD· 1 shared Jian He· 1 shared Jianguo HeiD· 1 shared Kaijie LiuiD· 1 shared Mǎng ShīiD· 1 shared Pan FangiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperEvolutionary Biology

Deyin GuoORCID

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1 paper

Recent·Most cited

Alignment-free phylogenetic inference via hyperbolic protein language models

yongtao Shan, Pan Fang, Yuqi Liu, Yuanfei Pan, Kaijie Liu, Yong He, Xue Liu, Weichen Wu, Guirong Xue, Jian He, Deyin Guo, Jianguo He, Edward Charles Holmes, Mǎng Shī, Zhaorong Li

LucaPhylo infers phylogenetic trees from unaligned protein sequences using hyperbolic geometry and protein language models, achieving accuracy comparable to alignment-based methods for divergent RNA viruses.

bioRxiv · May 29, 2026 · PreprintEvolutionary Biology