Author

Jian He

Shanghai Jiao Tong University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Same name, identified by ORCID

Biology Disciplines

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Bioinformatics· 1 Cell Biology· 1 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:host-pathogen & immune response· 1 Organism:human· 1 Research Focus:phylogenetics / evolution· 1

Frequent Co-Authors

Deyin GuoiD· 1 shared Doudou Hu· 1 shared Edward Charles HolmesiD· 1 shared Guirong XueiD· 1 shared Hui Zhu WangiD· 1 shared Jiajin Qian· 1 shared Jianguo HeiD· 1 shared Jingchen SuniD· 1 shared

Activity by Year

2019-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 18 mutual co-author links

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1 shared paperEvolutionary Biology

Deyin GuoORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

Angiogenesis Guided by Bombyx mori Silk Proteins is Molecular Weight-Dependent

Tiandong Li, Jian He, Jiajin Qian, Yeyuan Wang, Jingchen Sun, Doudou Hu

This study investigates how molecular weight of silk proteins affects angiogenesis, finding that high-MW sericin inhibits while low-MW sericin and fibroin promote angiogenic activity through macrophage polarization.

bioRxiv · Jun 29, 2026 · PreprintCell Biology

Alignment-free phylogenetic inference via hyperbolic protein language models

yongtao Shan, Pan Fang, Yuqi Liu, Yuanfei Pan, Kaijie Liu, Yong He, Xue Liu, Weichen Wu, Guirong Xue, Jian He, Deyin Guo, Jianguo He, Edward Charles Holmes, Mǎng Shī, Zhaorong Li

LucaPhylo infers phylogenetic trees from unaligned protein sequences using hyperbolic geometry and protein language models, achieving accuracy comparable to alignment-based methods for divergent RNA viruses.

bioRxiv · May 29, 2026 · PreprintEvolutionary Biology

HspA1B Is a Prognostic Biomarker and Correlated With Immune Infiltrates in different subtypes of Breast Cancers

Jian He, Hui Zhu Wang

This study identifies HspA1B as a prognostic biomarker in breast cancer and shows its correlation with immune infiltrates across multiple cancer types.

bioRxiv · Aug 5, 2019 · PreprintBioinformatics