SPArrOW: a flexible, interactive and scalable pipeline for spatial transcriptomics analysis
Lotte Pollaris, Bavo Vanneste, Benjamin Rombaut, Arne Defauw, Frank Vernaillen, Julien Mortier, Wout Vanhenden, Liesbet Martens, Tinne Thoné, Jean‐François Hastir, Anna Bujko, Wouter Saelens, Jean‐Christophe Marine, Hilde Nelissen, Evelien Van Hamme, , Yvan Saeys
SPArrOW is a pipeline for spatial transcriptomics analysis that improves data quality, provides visual quality checks, and enables interactive exploration and optimization of processing parameters.
bioRxiv · Jul 4, 2024 · PreprintBioinformatics