Frank Vernaillen

Navigating the rapidly evolving landscape of sequencing-based spatial transcriptomics technologies: a comprehensive multi-platform benchmark

This study benchmarks multiple sequencing-based spatial transcriptomics platforms across tissue types and preservation methods to evaluate their performance and establish standardized metrics for future research.

SPArrOW: a flexible, interactive and scalable pipeline for spatial transcriptomics analysis

SPArrOW is a pipeline for spatial transcriptomics analysis that improves data quality, provides visual quality checks, and enables interactive exploration and optimization of processing parameters.

A “Human-in-the-Loop” Approach for Semi-automated Image Restoration in Electron Microscopy

This paper introduces a human-in-the-loop framework for improving EM image quality through interactive image restoration and analysis.