Author

Xareni Galindo

Centre National de la Recherche Scientifique

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:clustering· 2 Approach:deep learning· 2 Assay:imaging· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Approach:contrastive learning· 1 Research Focus:dimensionality reduction· 1

Frequent Co-Authors

Florian LevetiD· 2 shared Rémi GallandiD· 2 shared Thierno Barry· 2 shared Anne BéghiniD· 1 shared Charlotte RivièreiD· 1 shared Edgar Lefevre· 1 shared Emmanuel BouilholiD· 1 shared Jean‐Baptiste SibaritaiD· 1 shared

Activity by Year

2022-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 35 mutual co-author links

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2 shared papersBioinformatics

Florian LevetORCID

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2 papers

Recent·Most cited

BioinformaticsInternational Joint Conference on Biomedical Engineering Systems and Technologies (BIOSTEC)Peer-reviewedJan 1, 2024

3D Nuclei Segmentation by Combining GAN Based Image Synthesis and Existing 3D Manual Annotations

Xareni Galindo, Thierno Barry, Pauline Guyot…·Florian Levet

The paper presents a method to segment 3D nuclei in low signal-to-noise ratio images using a combination of 2D Stardist and a conditional GAN to generate synthetic 3D masks.

2 citations

imagingdeep learning

𝕏 PostBluesky

BioinformaticsbioRxivPreprintOct 27, 2022

SalienceNet: an unsupervised Image-to-Image translation method for nuclei saliency enhancement in microscopy images

Emmanuel Bouilhol, Edgar Lefevre, Thierno Barry…·Macha Nikolski

SalienceNet enhances nuclei saliency in low-light microscopy images, improving segmentation accuracy by 30% with Otsu thresholding and 26% with StarDist.

1 citation

imagingdeep learning

𝕏 PostBluesky