Evaluating computational approaches for comparison of protein expression across cancer indications
Jixin Wang, Xiaowen Tian, Wen Yu, Ben Pullman, John Bullen, Elaine M. Hurt, Wenyan Zhong
The paper evaluates normalization strategies for creating a pan-cancer protein expression dataset from CPTAC, finding global quantile normalization most effective for cross-cohort comparisons.
bioRxiv · Aug 26, 2024 · PreprintBioinformatics