Author

Xingcun Fan

East China University of Science and Technology

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Bioinformatics· 3

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:gene regulatory network inference· 2 Organism:yeast· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Research Focus:drug response / drug discovery· 1

Frequent Co-Authors

Hongzhong LuiD· 3 shared Xuefeng YaniD· 3 shared Guangming Xiang· 2 shared Luchi XiaoiD· 2 shared Wenxing LiaoiD· 2 shared Gengrong GaoiD· 1 shared Haoyu WangiD· 1 shared Le WangiD· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersBioinformatics

Hongzhong LuORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

scYeast: a Biological-knowledge-guided Foundation Model on Yeast Single-Cell Transcriptomics

Xingcun Fan, Wenxing Liao, Luchi Xiao, Xuefeng Yan, Hongzhong Lu

scYeast is a foundation model for yeast single-cell transcriptomics that integrates biological priors, excelling in zero-shot tasks and transfer learning to other omics data.

Synthetic and Systems Biotechnology · Jul 17, 2026Peer-reviewedBioinformatics

Efficient Cell Factory Design by Combining Meta-Heuristic Algorithm with Enzyme Constrained Metabolic Models

Wenxing Liao, Gengrong Gao, Haoyu Wang, Xingcun Fan, Le Wang, Siwei He, Guangming Xiang, Xuefeng Yan, Hongzhong Lu

MetaStrain combines enzyme-constrained models with meta-heuristic algorithms to efficiently identify combinatorial gene targets for improving microbial product yields.

Bioresource Technology · Apr 23, 2026Peer-reviewedBioinformatics

Decoding yeast transcriptional regulation via a data- and mechanism-driven distributed large-scale network model

Xingcun Fan, Guangming Xiang, Wenbin Liao, Luchi Xiao, Siwei He, Na Luo, Hongzhong Lu, Xuefeng Yan

This paper introduces a distributed large-scale neural network model for yeast transcriptional regulation, capable of predicting dynamic regulatory relationships and identifying key transcription factors.

Synthetic and Systems Biotechnology · Jun 14, 2025Peer-reviewedBioinformatics