Author

Yudi Hu

Nanjing UniversityPrimary ORCID profile (0000-0002-4728-6339 · 1 paper)Unclaimed ORCID profile · follow to get notified of new preprints

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Same name, identified by ORCID

Yudi HuiD1 paper · University of California San Diego

Biology Disciplines

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Bioinformatics· 1 Cell Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Organism:human· 2 Research Focus:cell-cell communication· 1 Research Focus:clustering· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Hongkun Fang· 1 shared Jie LiiD· 1 shared Jing YangiD· 1 shared Jintao GuoiD· 1 shared Jun ReniD· 1 shared Qiyuan LiiD· 1 shared Rong Li YangiD· 1 shared Shiming Sun· 1 shared

Activity by Year

2025-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperBioinformatics

Hongkun Fang

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Author profile →

2 papers

Recent·Most cited

Cocktail Chemical Labeling for In-Depth Surfaceome Profiling of Bone-Marrow Derived Dendritic Cells

Shiming Sun, SiYang Maggie Liu, Tao Deng, Yudi Hu, Rong Li Yang, Jie Li, Yun Ge

This paper introduces a cocktail chemical labeling method using [Ru(bpy)3]Cl2 to profile the surfaceome of dendritic cells with high coverage and reproducibility.

Analytical Chemistry · Oct 3, 2025Peer-reviewedCell Biology

MGPfactXMBD: A Model-Based Factorization Method for scRNA Data Unveils Bifurcating Transcriptional Modules Underlying Cell Fate Determination

Jun Ren, Ying Zhou, Yudi Hu, Jing Yang, Hongkun Fang, Xuejing Lyu, Jintao Guo, Xiaodong Shi, Qiyuan Li

MGPfactXMBD is a model-based manifold-learning framework for scRNA-seq data that identifies bifurcating transcriptional modules underlying cell fate determination, outperforming existing methods in trajectory inference and biological interpretation.

eLife · Feb 5, 2025Peer-reviewedBioinformatics