Author

Yuto Ohnishi

Ritsumeikan University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Developmental Biology· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Organism:C. elegans· 2 Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1

Frequent Co-Authors

Masahiro ItoiD· 2 shared Muhamad FahmiiD· 2 shared Yukihiko KubotaiD· 2 shared Aimi Tomita· 1 shared Arashi Esaki· 1 shared Gen Yasui· 1 shared Hiroki Yamashita· 1 shared Hiromu Kitagawa· 1 shared

Activity by Year

2019-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersDevelopmental Biology

Masahiro ItoORCID

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2 papers

Recent·Most cited

Overlapping and non-overlapping roles of the class-I histone deacetylase-1 corepressors, LET-418, SIN-3, and SPR-1 in Caenorhabditis elegans embryonic development

Yukihiko Kubota, Yuto Ohnishi, Tasuku Hamasaki, Gen Yasui, Natsumi Ota, Hiromu Kitagawa, Arashi Esaki, Muhamad Fahmi, Masahiro Ito

The paper investigates the roles of three corepressors in C. elegans embryonic development, finding overlapping and distinct functions in gene regulation and developmental progression.

Genes & Genomics · Mar 19, 2021Peer-reviewedDevelopmental Biology

Gene Cascade Finder: A tool for identification of gene cascades and its application in Caenorhabditis elegans

Yusuke Nomoto, Yukihiko Kubota, Yuto Ohnishi, Kota Kasahara, Aimi Tomita, Takehiro Oshime, Hiroki Yamashita, Muhamad Fahmi, Masahiro Ito

The paper introduces Gene Cascade Finder (GCF), a tool to identify gene cascades from RNA-Seq data, and applies it to Caenorhabditis elegans to uncover regulatory relationships in development.

PLoS ONE · Sep 10, 2019Peer-reviewedGenomics