Author

Masahiro Ito

Ritsumeikan UniversityORCID 0000-0001-8364-8440Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Developmental Biology· 2 Genomics· 1

Signature Assays, Organisms & Methods

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Organism:C. elegans· 3 Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Yukihiko KubotaiD· 3 shared Muhamad FahmiiD· 2 shared Natsumi Ota· 2 shared Yuto Ohnishi· 2 shared Aimi Tomita· 1 shared Arashi Esaki· 1 shared Asako SugimotoiD· 1 shared Gen Yasui· 1 shared

Activity by Year

2019-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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3 shared papersDevelopmental Biology

Yukihiko KubotaORCID

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3 papers

Recent·Most cited

Developmental BiologyGenes to CellsPeer-reviewedApr 17, 2022

The PAF1 complex cell-autonomously promotes oogenesis in Caenorhabditis elegans

Yukihiko Kubota, Natsumi Ota, Hisashi Takatsuka…·Masahiro Ito

This study shows that the PAF1 complex is required for oogenesis in C. elegans by promoting oocyte maturation gene expression.

5 citations

C. elegansexperimental assay

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Developmental BiologyGenes & GenomicsPeer-reviewedMar 19, 2021

Overlapping and non-overlapping roles of the class-I histone deacetylase-1 corepressors, LET-418, SIN-3, and SPR-1 in Caenorhabditis elegans embryonic development

Yukihiko Kubota, Yuto Ohnishi, Tasuku Hamasaki…·Masahiro Ito

The paper investigates the roles of three corepressors in C. elegans embryonic development, finding overlapping and distinct functions in gene regulation and developmental progression.

5 citations

C. elegansstatistical model

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GenomicsPLoS ONEPeer-reviewedSep 10, 2019

Gene Cascade Finder: A tool for identification of gene cascades and its application in Caenorhabditis elegans

Yusuke Nomoto, Yukihiko Kubota, Yuto Ohnishi…·Masahiro Ito

The paper introduces Gene Cascade Finder (GCF), a tool to identify gene cascades from RNA-Seq data, and applies it to Caenorhabditis elegans to uncover regulatory relationships in development.

3 citations

C. elegansbulk RNA-seq

𝕏 PostBluesky