Author

Z. Csabai

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3 Ecology· 2 Zoology· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Research Focus:database / resource· 2 Research Focus:ecology & biodiversity· 2 Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2 Assay:long-read sequencing· 2 Assay:metagenomics· 2 Approach:benchmark study· 1

Frequent Co-Authors

B. Kakuk· 3 shared D. Tombacz· 3 shared G. Gulyas· 3 shared I. Prazsak· 3 shared Z. Boldogkoi· 3 shared A. Dormo· 2 shared D. Ruzek· 2 shared G. E. Toth· 2 shared

Activity by Year

2019-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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Curved chords = mutual co-authorship

3 shared papersMicrobiology

B. Kakuk

Mutual co-authors in cluster

Author profile →

6 papers

Recent·Most cited

Age-dependent variation of aedeagal morphology in Agabus uliginosus and the status of A. lotti (Coleoptera, Dytiscidae)

K. Dettner, Z. Kovacs, T. Rewicz, Z. Csabai

The study examines age-related morphological changes in Agabus uliginosus and suggests A. lotti is a junior synonym, supported by molecular analysis of COI sequences.

bioRxiv · May 7, 2024Zoology

Exploring the Transcriptomic Profile of Human Monkeypox Virus via CAGE and Native RNA Sequencing Approaches

Z. Boldogkoi, G. A. Nagy, D. Tombacz, I. Prazsak, Z. Csabai, A. Dörmo, G. Gulyas, G. Kemenesi, G. E. Toth, J. Holoubek, D. Ruzek, B. Kakuk

This study uses CAGE and long-read RNA sequencing to analyze the transcriptional architecture of human monkeypox virus, identifying alternative TSSs, TESs, promoter elements, and novel genes.

bioRxiv · Apr 29, 2024Microbiology

Cross-Comparison of Gut Metagenomic Profiling Strategies

G. Gulyas, B. Kakuk, A. Dormo, T. Jaray, I. Prazsak, Z. Csabai, M. M. Henkrich, Z. Boldogkoi, D. Tombacz

This study compares gut metagenomic profiling strategies across multiple stages and introduces an optimized pipeline and software tool for reliable and comparable results.

bioRxiv · Nov 25, 2023Microbiology

In-depth Temporal Transcriptome Profiling of Monkeypox and Host Cells using Nanopore Sequencing

B. Kakuk, A. Dormo, Z. Csabai, G. Kemenesi, J. Holoubek, D. Ruzek, I. Prazsak, V. E. Dani, B. Denes, G. Torma, F. Jakab, G. E. Toth, F. V. Foldes, B. Zana, Z. Lanszki, , Z. Boldogkoi

This study uses Oxford Nanopore long-read RNA-Sequencing to profile the transcriptome of monkeypox virus and host cells, revealing gene expression dynamics and host transcriptomic changes.

Scientific Data · May 9, 2023Peer-reviewedMicrobiology

DISPERSE - A trait database to assess the dispersal potential of aquatic macroinvertebrates

R. Sarremejane, N. Cid Puey, T. Datry, R. Stubbington, M. Alp, M. Canedo-Arguelles, A. Cordero-Rivera, Z. Csabai, C. Gutierrez Canovas, J. Heino, M. Forcellini, A. Millan, A. Paillex, P. Paril, M. Polasek, , N. Bonada

The paper introduces DISPERSE, a database of dispersal-related traits for aquatic macroinvertebrates, to improve ecological predictions and conservation strategies.

bioRxiv · Feb 21, 2020 · PreprintEcology

DNA barcode reference libraries for the monitoring of aquatic biota in Europe: Gap-analysis and recommendations for future work

H. Weigand, A. J. Beermann, F. Ciampor, F. O. Costa, Z. Csabai, S. Duarte, M. F. Geiger, M. Grabowski, F. Rimet, B. Rulik, M. Strand, N. Szucsich, A. M. Weigand, E. Willassen, S. A. Wyler, , T. Ekrem

This paper analyzes gaps in DNA barcode reference libraries for European aquatic species and recommends strategies to improve their completeness and quality for biomonitoring.

bioRxiv · Mar 14, 2019Ecology