Author

Zixian Zhu

Columbia University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Approach:diffusion model· 1 Research Focus:drug response / drug discovery· 1 Research Focus:trajectory inference· 1

Frequent Co-Authors

Cong XuiD· 1 shared Daniel Naveed TavakoliD· 1 shared Elham AziziiD· 1 shared Gordana Vunjak‐NovakoviciD· 1 shared Guy Y. GartyiD· 1 shared Haotian YeiD· 1 shared James ZouiD· 1 shared Kam W. LeongiD· 1 shared

Activity by Year

2025-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperBioinformatics

Cong XuORCID

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1 paper

Recent·Most cited

Squidiff: Predicting cellular development and responses to perturbations using a diffusion model

Siyu He, Yuefei Zhu, Daniel Naveed Tavakol, Haotian Ye, Yeh‐Hsing Lao, Zixian Zhu, Cong Xu, Shradha Chauhan, Guy Y. Garty, Raju Tomer, Gordana Vunjak‐Novakovic, James Zou, Elham Azizi, Kam W. Leong

Squidiff predicts transcriptomic changes across cell types in response to environmental stimuli using a diffusion model, enabling in silico screening for drug discovery and precision medicine.

Nature Methods · Nov 3, 2025Peer-reviewedBioinformatics