Author

Shradha Chauhan

Columbia University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Neuroscience· 2 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Organism:mouse· 2 Organism:bacteria (other)· 1 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Approach:diffusion model· 1 Research Focus:drug response / drug discovery· 1 Organism:human· 1

Frequent Co-Authors

Raju TomeriD· 3 shared Cheng GongiD· 2 shared Cong XuiD· 2 shared Estanislao Daniel De La Cruz· 2 shared Kam W. LeongiD· 2 shared Malika S. Datta· 2 shared Yannan CheniD· 2 shared Andrew J. DworkiD· 1 shared

Activity by Year

2023-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 35 mutual co-author links

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Curved chords = mutual co-authorship

3 shared papersNeuroscience

Raju TomerORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Squidiff: Predicting cellular development and responses to perturbations using a diffusion model

Siyu He, Yuefei Zhu, Daniel Naveed Tavakol, Haotian Ye, Yeh‐Hsing Lao, Zixian Zhu, Cong Xu, Shradha Chauhan, Guy Y. Garty, Raju Tomer, Gordana Vunjak‐Novakovic, James Zou, Elham Azizi, Kam W. Leong

Squidiff predicts transcriptomic changes across cell types in response to environmental stimuli using a diffusion model, enabling in silico screening for drug discovery and precision medicine.

Nature Methods · Nov 3, 2025Peer-reviewedBioinformatics

Scalable projected Light Sheet Microscopy for high-resolution imaging of living and cleared samples

Yannan Chen, Shradha Chauhan, Cheng Gong, Hannah T. Dayton, Cong Xu, Estanislao Daniel De La Cruz, Yu-Young Wesley Tsai, Malika S. Datta, Gorazd B. Rosoklija, Andrew J. Dwork, Joseph John Mann, Maura Boldrini, Kam W. Leong, Lars E. P. Dietrich, Raju Tomer

This paper introduces a cost-effective, scalable light sheet microscopy framework for high-resolution imaging of living and cleared samples, demonstrating its application on various biological samples.

Nature Biomedical Engineering · Aug 29, 2024Peer-reviewedNeuroscience

Whole-brain mapping reveals the divergent impact of ketamine on the dopamine system

Malika S. Datta, Yannan Chen, Shradha Chauhan, Jing Zhang, Estanislao Daniel De La Cruz, Cheng Gong, Raju Tomer

This study uses whole-brain mapping to show that chronic ketamine exposure reduces dopamine neurons in midbrain regions but increases them in the hypothalamus, with divergent effects on brain connectivity.

Cell Reports · Dec 1, 2023Peer-reviewedNeuroscience