Elena Perrin

MErlin integrates bacterial methylome data with other omics data to produce gene-level evidence and reports, using a modular toolkit and LLM interface.

This study compares how root exudates from wild and cultivated rice affect bacterial endophytes, finding that wild rice promotes more beneficial microbial interactions.

This study shows that acquiring additional quorum sensing modules reduces population size variability in Burkholderia by buffering noise in growth dynamics.

The paper investigates metabolic robustness and transcriptomic reprogramming in a cold-adapted bacterium at different temperatures, revealing key intermediates and pathway cross-talk involved in adaptation.

The paper models growth interactions in a diatom-bacterium co-culture using experimental data to create a mathematical model that explains observed dynamics.

The paper models how additional regulatory modules in bacterial quorum sensing improve response speed and control.

The paper shows that diauxic growth and co-utilization of multiple substrates can coexist in complex environments, with nutrient uptake order determined by biomass yield and growth rate.

The paper studies the emergence and features of multipartite genomes in Burkholderiaceae using comparative genomics, finding that secondary replicons enhance gene acquisition for environmental adaptation.