Author

Charlie Y. Shi

Howard Hughes Medical InstituteORCID 0000-0001-5229-9196Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Molecular Biology· 2

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Approach:experimental assay· 2 Organism:mouse· 2 Research Focus:cell type annotation· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Assay:imaging· 1

Frequent Co-Authors

Benjamin KleavelandiD· 2 shared David P. BarteliD· 2 shared Joanna Stefano· 2 shared Lara E. ElcavageiD· 1 shared Raghu R. ChivukulaiD· 1 shared

Activity by Year

2018-2023 · peak 1/yr

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5 top collaborators · 10 mutual co-author links

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2 shared papersMolecular Biology

Benjamin KleavelandORCID

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2 papers

Recent·Most cited

Molecular BiologyGenome ResearchPeer-reviewedSep 1, 2023

The widespread influence of ZSWIM8 on microRNAs during mouse embryonic development

Charlie Y. Shi, Lara E. Elcavage, Raghu R. Chivukula…·David P. Bartel

The paper investigates the role of ZSWIM8 in miRNA degradation during mouse embryonic development, finding that its loss leads to developmental defects and altered miRNA accumulation.

28 citations

mousebulk RNA-seq

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Molecular BiologyCellPeer-reviewedJun 7, 2018

✦ In-depth digest

A Network of Noncoding Regulatory RNAs Acts in the Mammalian Brain

Benjamin Kleaveland, Charlie Y. Shi, Joanna Stefano, David P. Bartel

The lncRNA Cyrano drives multiple-turnover degradation of miR-7 in mouse brain, which protects the circRNA Cdr1as from miR-7-dependent, partly miR-671-sliced destruction.

606 citationstop 1%

mousehuman

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