Author

Richard Hu

Johns Hopkins UniversityORCID 0000-0001-5381-0005Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Richard Hu2 papers · University of California, Los Angeles

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:benchmarking· 2 Research Focus:gene regulatory network inference· 2 Research Focus:software / tool· 2 Approach:statistical model· 2 Research Focus:variant calling· 2 Organism:Arabidopsis· 1 Assay:bulk RNA-seq· 1 Approach:experimental assay· 1

Frequent Co-Authors

Ida ShinderiD· 2 shared Mihaela PerteaiD· 2 shared Geo M. PerteaiD· 1 shared Hyun Joo JiiD· 1 shared Kuan-Hao ChaoiD· 1 shared Zoe RudnickiD· 1 shared

Activity by Year

2023-2026 · peak 1/yr

Co-Author Collaboration Network

6 top collaborators · 11 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersGenomics

Ida ShinderORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

GenomicsNature MethodsPeer-reviewedMay 19, 2026

StringTie3 Improves Total RNA-seq Assembly by Resolving Nascent and Mature Transcripts

Ida Shinder, Geo M. Pertea, Richard Hu…·Mihaela Pertea

StringTie3 improves total RNA-seq assembly by resolving nascent and mature transcripts, reducing errors and enhancing precision and sensitivity in both short- and long-read data.

16 citationstop 1%

bulk RNA-seqstatistical model

𝕏 PostBluesky

GenomicsbioRxivPreprintMay 10, 2023

EASTR: Correcting systematic alignment errors in multi-exon genes

Ida Shinder, Richard Hu, Hyun Joo Ji…·Mihaela Pertea

EASTR corrects systematic alignment errors in multi-exon genes by detecting and removing falsely spliced transcripts, improving alignment accuracy across species.

DOI 10.1101/2023.05.10.540179

humanArabidopsis

𝕏 PostBluesky