Author

Sarah K. Yeo

BC Cancer AgencyORCID 0000-0001-5814-4187Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 2 Research Focus:benchmarking· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1 Research Focus:genome assembly· 1 Organism:human· 1 Assay:long-read sequencing· 1 Research Focus:sequence-to-function modeling· 1

Frequent Co-Authors

İnanç BiroliD· 2 shared Justin ChuiD· 2 shared Emre Erhan· 1 shared Hamid Mohamadi· 1 shared Jeffery Tse· 1 shared Lauren CoombeiD· 1 shared Readman ChiuiD· 1 shared René L. WarreniD· 1 shared

Activity by Year

2017-2018 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 20 mutual co-author links

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2 shared papersBioinformatics

İnanç BirolORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintOct 5, 2018

Improving on hash-based probabilistic sequence classification using multiple spaced seeds and multi-index Bloom filters

Justin Chu, Hamid Mohamadi, Emre Erhan…·İnanç Birol

The paper introduces a multi-index Bloom filter for alignment-free sequence classification, showing improved sensitivity and efficiency over existing methods in read binning and taxonomic assignment.

3 citations

DNA methylationwhole-genome sequencing

𝕏 PostBluesky

GenomicsBioinformaticsPeer-reviewedOct 20, 2017

ARCS: Assembly Roundup by Chromium Scaffolding

Sarah K. Yeo, Lauren Coombe, René L. Warren…·İnanç Birol

ARCS uses Chromium linked read barcoding information to improve draft genome contiguity, increasing contiguity six-fold with moderate coverage.

202 citationstop 2%

humanwhole-genome sequencing

𝕏 PostBluesky