Author

Atashi Sharma

Virginia TechORCID 0000-0001-6299-7553Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:Arabidopsis· 3 Approach:experimental assay· 3 Assay:whole-genome sequencing· 3 Research Focus:genome assembly· 2 Research Focus:variant calling· 2 Research Focus:gene regulatory network inference· 1 Approach:statistical model· 1

Frequent Co-Authors

Zhijian Jake TuiD· 4 shared Adam M. PhillippyiD· 2 shared Chujia CheniD· 2 shared Igor A. AntoshechkiniD· 2 shared Igor V. SharakhoviD· 2 shared J. Spencer JohnstoniD· 2 shared Jacob E. CrawfordiD· 2 shared Jeffrey R. PowelliD· 2 shared

Activity by Year

2018-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 38 mutual co-author links

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4 shared papersGenomics

Zhijian Jake TuORCID

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4 papers

Recent·Most cited

Marker-assisted mapping enables effective forward genetic analysis in the arboviral vector Aedes aegypti, a species with vast recombination deserts

Chujia Chen, Austin Compton, Katerina Nikolouli, Aihua Wang, Azadeh Aryan, Atashi Sharma, Yumin Qi, Camden Dellinger, Melanie Hempel, Mark Potters, Antonios A. Augustinos, David W. Severson, Kostas Bourtzis, Zhijian Jake Tu

This paper develops a marker-assisted mapping strategy to enable forward genetic analysis in Aedes aegypti, identifying a causal gene for a sex-linked mutation and demonstrating its utility for genetic sexing and resistance gene mapping.

Genetics · Sep 9, 2022Peer-reviewedGenetics

Chromosome-level genome assemblies of the malaria vectors Anopheles coluzzii and Anopheles arabiensis

Anton Zamyatin, Pavel Avdeyev, Jiangtao Liang, Atashi Sharma, Chujia Chen, Varvara Lukyanchikova, Nikita Alexeev, Zhijian Jake Tu, Max A. Alekseyev, Igor V. Sharakhov

This study produces chromosome-level genome assemblies for Anopheles coluzzii and Anopheles arabiensis using long-read sequencing and Hi-C scaffolding, improving reference-quality genomes and enabling identification of chromosomal inversion breakpoints.

GigaScience · Mar 1, 2021Peer-reviewedGenomics

Improved reference genome of the arboviral vector Aedes albopictus

Umberto Palatini, Reem A. Masri, Luciano V. Cosme, Sergey Koren, Françoise Thibaud‐Nissen, James Kite Biedler, Flávia Krsticevic, J. Spencer Johnston, Rebecca Halbach, Jacob E. Crawford, Igor A. Antoshechkin, Anna‐Bella Failloux, Elisa Pischedda, Michele Marconcini, Jay Ghurye, , Mariangela Bonizzoni

The paper presents an improved genome assembly of Aedes albopictus, revealing new biological features and enabling population and developmental studies.

Genome biology · Aug 26, 2020Peer-reviewedGenomics

Improved Aedes aegypti mosquito reference genome assembly enables biological discovery and vector control

Benjamin John Matthews, Olga Dudchenko, Sarah B. Kingan, Sergey Koren, Igor A. Antoshechkin, Jacob E. Crawford, William J. Glassford, Margaret Herre, Seth N. Redmond, Noah H. Rose, Gareth D. Weedall, Yang Wu, Sanjit Singh Batra, Carlos A. Brito-Sierra, Steven David Buckingham, , Leslie B. Vosshall

The paper presents an improved Aedes aegypti genome assembly, AaegL5, which enhances biological understanding and vector control efforts by resolving key genomic features and identifying new targets for intervention.

Nature · Nov 14, 2018Peer-reviewedGenomics