Author

Sandeep P. Mallya

Manipal Academy of Higher EducationORCID 0000-0001-6318-7165Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Cancer Biology· 1 Genomics· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Approach:experimental assay· 2 Organism:human· 2 Research Focus:cancer & tumor microenvironment· 1 Research Focus:differential expression· 1 Assay:long-read sequencing· 1 Organism:mouse· 1 Approach:statistical model· 1

Frequent Co-Authors

Kamalesh Dattaram MumbrekariD· 2 shared Krishna SharaniD· 2 shared Agastya Singh· 1 shared Amoolya KandettuiD· 1 shared Ashima Singh· 1 shared Babu Santhi Venkidesh· 1 shared Bola Sadashiva Satish RaoiD· 1 shared Daniel S. HigginsoniD· 1 shared

Activity by Year

2023-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 19 mutual co-author links

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2 shared papersCancer Biology

Kamalesh Dattaram MumbrekarORCID

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3 papers

Recent·Most cited

Cancer BiologybioRxivPreprintNov 16, 2024

Mitochondrial genome-encoded mitomiRs regulate cellular plasticity and susceptibility to ferroptosis in triple-negative breast cancer

Amoolya Kandettu, Joydeep Ghosal, Jesline Shaji Tharayil…·Sanjiban Chakrabarty

This study identifies mitochondrial-encoded miRNAs (mitomiRs) that regulate ferroptosis sensitivity in triple-negative breast cancer by modulating ZEB1 expression and metabolic reprogramming.

1 citation

humanbulk RNA-seq

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GenomicsbioRxivPreprintOct 17, 2024

Novel nanopore sequencing method for determining Human Papillomavirus integrations in tumors without the need for whole genome sequencing

Preetiparna Parida, Nivedita Mukherjee, Agastya Singh…·Rama Rao Damerla

The paper develops a nanopore sequencing method to identify HPV integrations in tumors without whole genome sequencing, validated in cell lines and cervical cancer patients.

2 citations

humanlong-read sequencing

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NeurosciencebioRxivPreprintJun 8, 2023

Low-dose exposure to malathion and radiation culminates in the dysregulation of multiple neuronal processes instigating neurotoxicity and activation of neurodegeneration pathways in mice hippocampus

Krishnamoorthi Rekha, Babu Santhi Venkidesh, Sangeetha Nayak…·Kamalesh Dattaram Mumbrekar

The paper investigates the molecular effects of malathion and radiation on mouse hippocampus, finding dysregulated neuronal processes and neurodegeneration pathways without behavioral changes.

1 citation

mousebulk RNA-seq

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