Author

Sergey Lyskov

Johns Hopkins UniversityORCID 0000-0001-6380-6712Unclaimed ORCID profile · follow to get notified of new preprints

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Sergey Lyskov1 paper

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Assay:protein structure· 1 Approach:statistical model· 1

Frequent Co-Authors

Ora Schueler‐FurmaniD· 2 shared Ajasja LjubetičiD· 1 shared Alisa KhramushiniD· 1 shared Amanda L. LoshbaughiD· 1 shared Amelie SteiniD· 1 shared Ameya HarmalkariD· 1 shared Andrew Leaver‐FayiD· 1 shared Andrew M. WatkinsiD· 1 shared

Activity by Year

2021-2026 · peak 1/yr

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10 top collaborators · 37 mutual co-author links

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2 shared papersBioinformatics

Ora Schueler‐FurmanORCID

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2 papers

Recent·Most cited

BioinformaticsJournal of Chemical Information and ModelingPeer-reviewedJun 16, 2026

Strategic template filtering accelerates fragment-based peptide docking

Nirit Trabelsi, Julia K. Varga, Alisa Khramushin…·Ora Schueler‐Furman

PatchMAN2 improves peptide-protein docking efficiency by filtering fragments and focusing sampling on relevant regions, reducing computational cost while maintaining accuracy.

DOI 10.1021/acs.jcim.6c00902

protein structurestatistical model

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BioinformaticsNature CommunicationsPeer-reviewedNov 29, 2021

Ensuring scientific reproducibility in bio-macromolecular modeling via extensive, automated benchmarks

Julia Koehler Leman, Sergey Lyskov, Steven Macauley Lewis…·Richard Bonneau

The paper presents a framework for ensuring reproducibility in bio-macromolecular modeling through automated benchmarks and a test server, demonstrating its utility for Rosetta and other tools.

26 citations

experimental assaybenchmarking

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