Author

Daniel J. Kass

University of PittsburghORCID 0000-0001-6597-7830Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Molecular Biology· 2 Immunology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:experimental assay· 3 Organism:human· 3 Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Organism:mouse· 2 Approach:statistical model· 2 Assay:ATAC-seq· 1

Frequent Co-Authors

Harinath Bahudhanapati· 2 shared Jiangning Tan· 2 shared Yingze ZhangiD· 2 shared Alma SolisiD· 1 shared Amelia RoselliiD· 1 shared Anatoli S. GleibermaniD· 1 shared Andrei V. GudkoviD· 1 shared Andrianova, Ekaterina,iD· 1 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 26 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersMolecular Biology

Harinath Bahudhanapati

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

ImmunologyScience Translational MedicinePeer-reviewedJun 3, 2026

Toll-Like-Receptor 5 protects against pulmonary fibrosis by reducing lung dysbiosis

Yosuke Sakamachi, Emma Wiley, Carol S. Trempus…·Stavros Garantziotis

TLR5 deficiency is linked to pulmonary fibrosis due to its role in preventing microbial dysbiosis following lung injury.

4 citationstop 3%

𝕏 PostBluesky

Molecular BiologyEuropean Respiratory JournalPeer-reviewedMay 4, 2023

Single-nucleus chromatin accessibility identifies a critical role for TWIST1 in idiopathic pulmonary fibrosis myofibroblast activity

Eleanor Valenzi, Harinath Bahudhanapati, Jiangning Tan…·Robert Lafyatis

The paper identifies TWIST1 as a critical regulator of myofibroblast activity in IPF using single-nucleus ATAC-seq and scRNA-seq integration.

34 citationstop 2%

𝕏 PostBluesky

Molecular BiologyPLoS ONEPeer-reviewedDec 31, 2021

Identification of a distal RXFP1 gene enhancer with differential activity in fibrotic lung fibroblasts involving AP-1

Ting‐Yun Chen, Xiaoyun Li, Gillian C. Goobie…·Yingze Zhang

The paper identifies a distal RXFP1 enhancer with reduced activity in fibrotic lung fibroblasts, involving AP-1 transcription factors, and links its activity to JUN and FOS expression.

1 citation

humanbulk RNA-seq

𝕏 PostBluesky