Alexander J. Ropelewski

MERFISHEYES provides a web-based platform for visualizing and sharing spatial transcriptomics data, enabling interactive exploration and cross-dataset comparisons.

This paper introduces a standards framework for integrating single-cell and spatial omics data into brain cell atlases, enabling interoperable and reusable knowledge-ready resources.

The paper introduces the Brain Image Library (BIL), a centralized resource for brain microscopy data that enables exploration, visualization, and analysis without data download.

The paper provides a guide to the BRAIN Initiative Cell Census Network (BICCN) data ecosystem, its tools, and resources for analyzing brain cell types across species.

The paper generates a multimodal cell census and atlas of the mammalian primary motor cortex, revealing a unified molecular genetic landscape and cross-species taxonomy of cell types.

The paper conducts a metagenomic analysis of the gut microbiota of Anadenobolus monilicornis using shotgun nanopore sequencing to reveal microbial diversity.