Author

Denise M. Malicki

University of California San DiegoORCID 0000-0001-6963-0738Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Genomics· 1 Pathology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:cell type annotation· 2 Organism:human· 2 Assay:bulk RNA-seq· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Assay:imaging· 1

Frequent Co-Authors

Aditi DuttaiD· 1 shared Alan G. MackayiD· 1 shared Anamika Yadav· 1 shared Benjamin LiniD· 1 shared Braden C. McFarlandiD· 1 shared C. Ryan MilleriD· 1 shared Chinmay Sharma· 1 shared Chris JonesiD· 1 shared

Activity by Year

2023-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperPathology

Aditi DuttaORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

PathologybioRxivPreprintNov 13, 2024

ecPath detects ecDNA in tumors from histopathology images

Mudra Choudhury, Lihe Liu, Anamika Yadav…·Sanju Sinha

ecPath detects ecDNA in tumors using H&E images, achieving good performance in predicting ecDNA status and identifying poor prognoses in low grade glioma patients.

4 citations

humanimaging

GenomicsbioRxivPreprintFeb 24, 2023

Cooperativity between H3.3K27M and PDGFRA poses multiple therapeutic vulnerabilities in human iPSC-derived diffuse midline glioma avatars

Kasey Skinner, Tomoyuki Koga, Shunichiro Miki…·Frank B. Furnari

This study develops human iPSC-derived tumor models to investigate the cooperative effects of H3.3K27M and PDGFRA mutations in DMG, identifying therapeutic vulnerabilities.

3 citations

humanbulk RNA-seq