Author

Newton Wahome

Coalition for Epidemic Preparedness InnovationsORCID 0000-0001-6996-6370Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 3

Signature Assays, Organisms & Methods

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Assay:protein structure· 2 Research Focus:protein structure prediction· 2 Research Focus:database / resource· 1 Approach:deep learning· 1 Research Focus:drug response / drug discovery· 1 Approach:graph neural network· 1 Approach:machine learning (classical)· 1 Assay:proteomics· 1

Frequent Co-Authors

Charlotte Mary DeaneiD· 2 shared Agata LaydoniD· 1 shared Aleksandr KovaltsukiD· 1 shared Alexander I. Cowen-RiversiD· 1 shared Chantal HuloiD· 1 shared Christian DallagoiD· 1 shared Claire MarksiD· 1 shared Constantin SchneideriD· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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2 shared papersBioinformatics

Charlotte Mary DeaneORCID

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3 papers

Recent·Most cited

BioinformaticsbioRxivPreprintOct 1, 2026

Systematic exploration of predicted quaternary structures within pandemic-relevant viral proteomes

Yewon Han, Riya Narain, Razan Abbara…·Joe Grove

The paper predicts quaternary structures of viral proteins using AlphaFold2 and AlphaFold-Multimer, identifying new insights into vaccinology and protease targets.

DOI 10.64898/2026.09.29.755321

virusprotein structure

𝕏 PostBluesky

BioinformaticsbioRxivPreprintOct 3, 2024

Computational design of developable therapeutic antibodies: efficient traversal of binder landscapes and rescue of escape mutations

Frédéric A. Dreyer, Constantin Schneider, Aleksandr Kovaltsuk…·Charlotte Mary Deane

This paper presents a computational pipeline for designing therapeutic antibodies using AI and physics-based methods, showing improved binding and developability across SARS-CoV-2 variants.

3 citations

proteomicsmachine learning (classical)

𝕏 PostBluesky

BioinformaticsBioinformaticsPeer-reviewedNov 12, 2022

Paragraph - Antibody paratope prediction using Graph Neural Networks with minimal feature vectors

Lewis Chinery, Newton Wahome, Iain H. Moal, Charlotte Mary Deane

Paragraph predicts antibody paratopes using graph neural networks with minimal features, outperforming existing tools without antigen information.

47 citations

protein structuregraph neural network

𝕏 PostBluesky